an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology & biological engineering.
Tag: biotech
IGEM
The iGEM Competition gives students the opportunity to push the boundaries of synthetic biology by tackling everyday issues facing the world. Made up of primarily university students, multidisciplinary teams work together to design, build, test, and measure a system of their own design using interchangeable biological parts and standard molecular biology techniques. Every year 6000 people dedicate their summer to iGEM and then come together in the fall to present their work and compete at the annual Jamboree.
looks like fun
454 sequencing
454 sequencing was used to discover a never-before-seen virus that was likely responsible for the deaths of 3 transplant patients who received organs from the same donor.
Protein Arrays
Existing protein arrays involve the tedious and lengthy process of expressing proteins in living cells followed by purifying, stabilizing, and spotting the samples. This process is a bottleneck in the preparation of the arrays. Moreover, functionally active proteins require careful manipulation, and the less that is needed the better. Our approach to developing a protein array, a Nucleic Acid-Programmable Protein Array (NAPPA), replaces the complex process of spotting purified proteins with the straightforward and much simpler process of spotting plasmid DNA. The system could produce any desired protein from synthesized DNA placed on the chip. It is another step in making protein production and engineering and biotechnology in general faster and cheaper.
Chimeric Immunity
Dr Sachs and Dr Cosimi tricked the body by transplanting a part of the donor’s bone marrow along with the organ. Since the cells of the immune system are derived from stem cells in the bone marrow, these patients go on to develop what is known as chimeric immunity, which blends elements from the immune systems of both the donor and the recipient.
Transplanting immune-system stem cells along with kidneys stops rejection, enables xenotransplantation.
deCODEme
60% more SNP for the same price as 23andme, plus you get to download the data. maybe i should get both 🙂
Personal Genome Project
The Personal Genome Project is a vision and coalition of projects across the world dedicated to creating public genome, health, and trait data. Sharing data is critical to scientific progress, but has been hampered by traditional research practices. The PGP approach is to invite willing participants to publicly share their personal data for the greater good.
i just volunteered.
Top 10 New Organisms
Genetic engineering is getting so easy, even a kid can do it. A team of students from the University of Alberta, “the Butanerds,” competed in the International Genetically Engineered Machines competition, creating an E. coli strain that produces butanol fuel (albeit rather inefficiently). The Butanerds have competition from a host of well-funded startups, like Synthetic Genomics and LS9, which are trying to genetically modify single-celled organisms to create the fuels of the future.
how long until “top 10 new human clades”?
DNA sample dry storage
The firm has simulated long-term storage equivalent to 13 years at room temperature, by applying higher temperatures than samples would normally endure. Such storage costs 33% as much as freezing the samples would. And when a sample is needed for analysis, you just add water, à la Sea Monkey. The market for this sort of thing is potentially huge. In contrast with the impression given by “CSI”, a popular crime series, DNA analysis is not something that takes a glamorous technician a few minutes in a moodily lit room. The FBI alone has a backlog of more than 200K unprocessed DNA samples from convicted criminals (85% of the samples it has collected during the past 6 years). This number has almost doubled in the past year, yet it may grow even faster in the future since what was once a procedure required only for sex offenders has now become obligatory for a range of felons from murderers to drug-addicts. Moreover, starting next year, both the federal authorities and a number of states will cast an even wider net by collecting DNA from everyone they arrest (as now happens in Britain). That will swell the haul of samples by at least 500K specimens a year.
a way to conserve biological material by drying. to revert, just add water.
3D Printing Microfluidics
The rapid and non-photolithographic approach to microfluidic pattern generation by leveraging the inherent shrinkage properties of biaxially oriented polystyrene thermoplastic sheets. This novel approach yields channels deep enough for mammalian cell assays, with demonstrated heights up to 80 µm. Moreover, we can consistently and easily achieve rounded channels, multi-height channels, and channels as thin as 65 µm in width. Finally, we demonstrate the utility of this simple microfabrication approach by fabricating a functional gradient generator. The whole process—from device design conception to working device—can be completed within minutes. DIY biology world isn’t close– if you’re ingenious and have the toys at hand, it’s here.