EES argues that while the existing framework of evolutionary theory, known as the “modern synthesis,” is basically solid, it needs to be expanded to account for newly recognized drivers of evolution. One such driver is epigenetics — gene-expression changes that stem from exposure to, say, pesticides. While these epigenetic changes are not encoded in an organism’s genes, they do give rise to physical and behavioral differences that natural selection can act upon. We now have a better picture of the regulatory process on genes. Epigenetics changes the landscape in genetics because it’s not only the pure DNA sequence which influences what’s going on at the level of proteins and enzymes. There’s this whole other stuff, the other 95 percent of the genome, that acts like rheostats — you slide this thing up and down, you get more or less of this protein. It’s a critical thing in how much of this protein is going to be made. It’s interesting to think about the way in which cultural phenomena, which we used to think were things by themselves, can have this effect on how much messenger RNA is made, and therefore on many aspects of gene regulation.
Tag: biology
NYC ATM microbes
Microorganisms associated with mollusks and bony fish predominated in Asian neighborhoods in Flushing and Manhattan’s Chinatown. Traces of microbes linked with chicken appeared more in a largely black community in Harlem. And ATMs in predominantly white neighborhoods were festooned with Xeromyces bisporus, a mold associated with the “spoilage of high-sugar foods such as cakes and confectionaries
Tree of Life Explorer
The tree of life shows how all life on earth is related. Each leaf represents a different species. The branches show how these many species evolved from common ancestors over billions of years. In our interactive tree of life you can explore the relationships between 2235362 species and wonder at 105281 images on a single zoomable page.
so good. i hope this succeeds.
20nm imaging
The technology incorporates several innovations in fluorescence microscopy and super-resolution microscopy and harnesses the same kind of “adaptive optics” technology used in astronomy – deformable mirrors that change shape to compensate for light distortion. In astronomy the deformable mirrors are used to compensate for atmospheric distortion to yield clear images of celestial objects. Deformable mirrors also can be used to counteract the distortion caused when light passes through biological tissue.
Largest war in history
The largest war in animal history — in fact, by numbers the largest war in history — is going on right now. The supercolony grew to cover most of the United States. Then it spread to England, Europe, Japan, Australia and New Zealand. L. humile is now abundant on every continent except Antarctica, and wherever she goes, she slaughters native ant species Things have not been perfect. Near San Diego, a schism formed, and a separate supercolony was created. The battlefront extends for km; some 30M ants die there every year. But for now, a global megacolony still persists, consisting of around 1T individuals: a humble brown ant united in war against every other ant alive.
GoT got nothing on these guys. Super vicious.
Cell Vaults
While many questions about vaults remain, including whether they serve as cargo transporters for the cell, their large, hollow interiors have led some scientists to see the nanobarrels as potential tools for the delivery of biomaterials. A variety of strategies for encapsulating biomaterials already exists, including viruses, liposomes, peptides, hydrogels, and synthetic and natural polymers, but the use of these materials is often limited by insufficient payload, immunogenicity, lack of targeting specificity, and the inability to control packaging and release. Vaults, on the other hand, possess all the features of an ideal delivery vehicle. These naturally occurring cellular nanostructures have a cavity large enough to sequester 100s of proteins; they are homogeneous, regular, highly stable, and easy to engineer; and, most of all, they are nonimmunogenic and totally biocompatible.
Parthogenesis
Can’t wait until MRA losers figure this out
Remember Dolly, the cloned sheep? Back in Glory Season, I speculated that it would be difficult to clone mammals and that hence there might still be some (slight) need for males, even in a hyper feminist world. Well, we’ve seen some ups and downs since. Dolly seemed to suggest that tech empowered female humans will be able to dispense with us hairy-inseminators in the future – and at times I admit, I wouldn’t blame em.
Only then Dolly died young, sickened with many diseases of aging and with shortened chromosomes, suggesting that a cloned mammal inherits some of the aging clock of the parent and does not reset its embryonic timer back to zero! Baaaah! So much for parthenogenesis and eliminating males.
Only now … another reversal! It seems 12 more Dolly clones are doing just fine, with no sign of premature senescence. So maybe it just took a better process. Sorry guys. Your services are no longer needed. (Except maybe for amusement and moving some furniture, now and then.) Try to tidy up a bit on your way out, hm?
For the first time, scientists have used genetic engineering to trigger ‘virgin birth’ in female animals that normally need a male partner to reproduce.
Previously, scientists have generated young mice and frogs with no genetic input from a male parent. But those offspring were made by tinkering with egg cells in laboratory dishes rather than by giving female animals the capacity for virgin birth, also known as parthenogenesis.
To identify the genes that underlie parthenogenesis, Sperling and her colleagues sequenced the genomes of two strains of the fly Drosophila mercatorum: one that reproduces sexually and another that reproduces through parthenogenesis. The researchers then compared gene activity in eggs from flies capable of parthenogenesis with that in eggs from flies capable of only sexual reproduction to identify the genes at work during one process but not the other.The comparison allowed the authors to identify 44 genes that were potentially involved in parthenogenesis. The researchers altered the equivalent genes in the fruit fly Drosophila melanogaster, which usually cannot reproduce asexually.
After altering various combinations of genes, the scientists hit on a combination that induced parthenogenesis in 11% of female fruit flies. Some of the offspring of these genetically engineered flies were also capable of parthenogenesis.
Although the parthenogenetic flies received genes only from their mothers, they weren’t always clones of their parent. Some had 3 sets of chromosomes, whereas eggs laid by mothers reproducing through parthenogenesis usually have only 2.
Model Organisms
Biology needs a taste of Morgan’s pre-fly days, when scientists studied a panoply of organisms. By focusing on 7 animals out of 9m species on Earth, we are missing a huge chunk of interesting biology. “We are due for a renaissance. We have narrowed our focus to a handful of organisms that statistically are highly unlikely to encompass the gamut of biological activity on the planet.”
Do we need to jail animals?
zoos are still prisons, at the end of the day. can we do better?
Maybe we don’t need to jail animals. Maybe we just need to improve our ability to observe them in situ. There’s still plenty of open space that is, or could be, conserved. And we’re getting really good at surveillance! Let’s put our new skill to a different use. Fly cameras over areas of wildlife parks inaccessible to tourist vehicles. Enable online visitors to adopt and follow individual animals and their groups. Make it possible for anyone to have the sort of experience Jane Goodall did. The drone cameras sound creepy, but unlike the vehicles that carry tourists through those parks, the drones will keep getting smaller and more unobtrusive.
Beeeeees
“One theory was that the queen was trapped in my car and the swarm were following,. But they couldn’t find the queen anywhere so I’ve no idea if that was right. Apparently bees can swarm at this time of the year and it is a very strong instinct for them to follow the queen. I still don’t really understand why because they couldn’t see the queen anywhere. Perhaps they just like the heat of my car. It is possible the queen had been attracted to something in the car – perhaps a sweet or food in the car. ” The swarm of around 20K had followed her and were sat around on the boot of the car.

The level of eusociality required for this is breathtaking.
2022-12-02: How eusociality may have evolved
Ant pupae—which are equivalent to the chrysalis stage of the butterfly—produce a milklike substance derived from molting fluid that is eaten by both adult ants and larvae. Typically, when insects molt, they secrete a fluid that’s simply resorbed by the animal when the molt is complete. But in ants, this nutrition-rich substance serves as a kind of “metabolic currency” within the colony and may have played a role in the ants’ evolutionary transition from a group of loosely cooperating individuals into a truly integrated superorganism